dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00583
Location and strand information: 51812 - 54385 (-)
Family: 3.A.9.1.2
Protein type: TC
Protein description: Chaperone protein ClpB

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00584
Location and strand information: 54560 - 55297 (-)
Family: null
Protein type: null
Protein description: Polyphenol oxidase

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00585
Location and strand information: 55444 - 56424 (-)
Family: null
Protein type: null
Protein description: Ribosomal large subunit pseudouridine synthase D

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00586
Location and strand information: 56542 - 57297 (+)
Family: 1.B.33.1.3
Protein type: TC
Protein description: Outer membrane protein assembly factor BamD

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00587
Location and strand information: 57587 - 59269 (-)
Family: GT83
Protein type: CAZyme
Protein description: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
Protein isoelectric point: 8.5339
Protein molecular weight: 63168.61
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00588
Location and strand information: 59256 - 60623 (-)
Family: null
Protein type: null
Protein description: UDP-glucose 6-dehydrogenase TuaD

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00589
Location and strand information: 61023 - 62159 (+)
Family: Aminotran_1_2
Protein type: STP
Protein description: UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00590
Location and strand information: 62166 - 63146 (+)
Family: GT2
Protein type: CAZyme
Protein description: Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Protein isoelectric point: 6.6031
Protein molecular weight: 36378.98
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00591
Location and strand information: 63143 - 65134 (+)
Family: null
Protein type: null
Protein description: Bifunctional polymyxin resistance protein ArnA

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00592
Location and strand information: 65127 - 66026 (+)
Family: null
Protein type: null
Protein description: putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00593
Location and strand information: 66064 - 67701 (+)
Family: GT83
Protein type: CAZyme
Protein description: Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
Protein isoelectric point: 9.3433
Protein molecular weight: 61682.6
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00594
Location and strand information: 67701 - 68045 (+)
Family: 2.A.7.22.1
Protein type: TC
Protein description: putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00595
Location and strand information: 68042 - 68449 (+)
Family: null
Protein type: null
Protein description: putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00596
Location and strand information: 68528 - 69856 (-)
Family: Pyr_redox_2
Protein type: STP
Protein description: NADH oxidase

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00597
Location and strand information: 69955 - 71355 (-)
Family: 2.A.23.1.4
Protein type: TC
Protein description: L-cystine uptake protein TcyP

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00598
Location and strand information: 71489 - 72775 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00599
Location and strand information: 73054 - 73833 (-)
Family: SBP_bac_3
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00600
Location and strand information: 73932 - 75416 (-)
Family: 3.D.2.1.1
Protein type: TC
Protein description: NAD(P) transhydrogenase subunit beta

Gene clsuter ID: MGYG000001691_6|CGC1
Gene ID: MGYG000001691_00601
Location and strand information: 75428 - 76954 (-)
Family: 3.D.2.1.1
Protein type: TC
Protein description: NAD(P) transhydrogenase subunit alpha

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001691_00583	Chaperone protein ClpB	TC	51812	54385	-	3.A.9.1.2
MGYG000001691_00584	Polyphenol oxidase	null	54560	55297	-	Cu-oxidase_4
MGYG000001691_00585	Ribosomal large subunit pseudouridine synthase D	null	55444	56424	-	S4\| PseudoU_synth_2
MGYG000001691_00586	Outer membrane protein assembly factor BamD	TC	56542	57297	+	1.B.33.1.3
MGYG000001691_00587	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase	CAZyme	57587	59269	-	GT83
MGYG000001691_00588	UDP-glucose 6-dehydrogenase TuaD	null	59256	60623	-	UDPG_MGDP_dh_N\| UDPG_MGDP_dh\| UDPG_MGDP_dh_C
MGYG000001691_00589	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase	STP	61023	62159	+	Aminotran_1_2
MGYG000001691_00590	Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	CAZyme	62166	63146	+	GT2
MGYG000001691_00591	Bifunctional polymyxin resistance protein ArnA	null	63143	65134	+	Formyl_trans_N\| Formyl_trans_C\| Epimerase
MGYG000001691_00592	putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD	null	65127	66026	+	Polysacc_deac_1
MGYG000001691_00593	Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase	CAZyme	66064	67701	+	GT83
MGYG000001691_00594	putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE	TC	67701	68045	+	2.A.7.22.1
MGYG000001691_00595	putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF	null	68042	68449	+	No domain
MGYG000001691_00596	NADH oxidase	STP	68528	69856	-	Pyr_redox_2
MGYG000001691_00597	L-cystine uptake protein TcyP	TC	69955	71355	-	2.A.23.1.4
MGYG000001691_00598	hypothetical protein	null	71489	72775	-	SDH_alpha
MGYG000001691_00599	hypothetical protein	STP	73054	73833	-	SBP_bac_3
MGYG000001691_00600	NAD(P) transhydrogenase subunit beta	TC	73932	75416	-	3.D.2.1.1
MGYG000001691_00601	NAD(P) transhydrogenase subunit alpha	TC	75428	76954	-	3.D.2.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature